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server: Parse cli flags

Warren Gifford requested to merge core/server-parse-flags into master

Created by: keegancsmith

server takes no command line flags, so we did not parse the flags. However, it is easy to accidently pass flags into server instead of docker. By parsing the flags, we should error out if an admin makes that mistake.

Fixes https://github.com/sourcegraph/sourcegraph/issues/1038

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