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codeintel: Try to improve performance of `canonicalizeDocuments`

Warren Gifford requested to merge ef/canonicalize-docs-improvement-question-mark into main

Created by: efritz

This PR changes the iteration order of work done in the LSIF upload conversion routine canonicalizeDocuments. Improvements should be a more cache-friendly iteration order of documents while trying to identify and reduce duplicates.

Test plan

  • Run the codeintel-QA pipeline
  • @varungandhi-src will identify if this is a likely fix to the recent Cloud slowdown

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